Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio casei |
| Strain | strain JB196 SAMN07141174.130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183861 bp
Thymine Count
1183544 bp
Guanine Count
816195 bp
Cytosine Count
803690 bp
Genome Length
3987290 bp
Protein-coding Genes
3418 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate lyase | CIK83_10950 | Not Available | Positive | 2382349 - 2383548 | 45555.1 |
| alginate lyase | CIK83_10955 | Not Available | Positive | 2383620 - 2385629 | 77221.8 |
| is5 family transposase | CIK83_10960 | Not Available | Positive | 2385860 - 2386780 | 35155.0 |
| is30 family transposase | CIK83_10965 | Not Available | Negative | 2387005 - 2387952 | 36615.1 |
| dna-binding protein | CIK83_10970 | Not Available | Negative | 2388161 - 2388613 | 16305.4 |
| site-specific integrase | CIK83_10975 | Not Available | Negative | 2389272 - 2391896 | 100051.0 |
| is3 family transposase | CIK83_10980 | Not Available | Positive | 2392321 - 2393864 | 57977.8 |
| hypothetical protein | CIK83_10985 | Not Available | Negative | 2393952 - 2396177 | 84891.3 |
| superoxide dismutase | CIK83_10990 | Not Available | Positive | 2396808 - 2397416 | 23225.9 |
| duf2753 family protein | CIK83_10995 | Not Available | Positive | 2397567 - 2398004 | 16682.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



