Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio casei |
| Strain | strain JB196 SAMN07141174.130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1183861 bp
Thymine Count
1183544 bp
Guanine Count
816195 bp
Cytosine Count
803690 bp
Genome Length
3987290 bp
Protein-coding Genes
3418 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trkh family potassium uptake protein | CIK83_00470 | Not Available | Negative | 96008 - 97453 | 52681.4 |
| trk system potassium transporter trka | CIK83_00475 | Not Available | Negative | 97471 - 98847 | 50307.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | CIK83_00480 | Not Available | Negative | 98915 - 100195 | 48030.3 |
| methionyl-trna formyltransferase | CIK83_00485 | Not Available | Negative | 100293 - 101255 | 35310.2 |
| peptide deformylase | CIK83_00490 | Not Available | Negative | 101334 - 101849 | 19525.6 |
| lysm peptidoglycan-binding domain-containing protein | CIK83_00495 | Not Available | Positive | 101981 - 103129 | 42254.8 |
| dna-protecting protein dpra | CIK83_00500 | Not Available | Positive | 103144 - 104286 | 41106.2 |
| duf494 domain-containing protein | CIK83_00505 | Not Available | Positive | 104321 - 104791 | 18231.9 |
| dna topoisomerase | CIK83_00510 | Not Available | Positive | 104807 - 105412 | 22707.3 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | CIK83_00515 | Not Available | Negative | 105456 - 106580 | 41138.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



