Stenotrophomonas sp. ATCM1_4

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas sp. ATCM1_4 is a rod-shaped bacterium characterized by the presence of flagella, which likely contributes to its motility. This species has a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and stability within its environment. The genetic information for this strain can be accessed through the accession number QPFB00000000.1, which provides a reference for further studies and comparative analyses. Stenotrophomonas species are known for their resilience and adaptability in various environments, often thriving in soil and aquatic habitats. They play a crucial role in biogeochemical cycles and can influence microbial communities through their interactions. Due to their metabolic versatility, members of this genus can utilize a wide range of organic compounds, contributing to nutrient cycling and ecosystem functioning. The ecological significance of Stenotrophomonas sp. ATCM1_4 may extend to its potential applications in biotechnology and agriculture, particularly in bioremediation or as plant growth-promoting rhizobacteria. Understanding the specific traits of this strain, including its flagellar motility and genetic composition, can provide insights into its ecological roles and potential utility in scientific and industrial applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas sp. ATCM1_4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stenotrophomonas sp. ATCM1_4 Scaffold_8, whole genome shotgun

Gene Summary

Adenine Count

694774 bp

Thymine Count

680558 bp

Guanine Count

1387181 bp

Cytosine Count

1424449 bp

Genome Length

4187822 bp

Protein-coding Genes

3596 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-quinone oxidoreductase subunit cATCM_09805Not AvailableNegative2135528 - 213628028001.8
nadh-quinone oxidoreductase subunit bATCM_09810Not AvailableNegative2136317 - 213687120268.8
nadh-quinone oxidoreductase subunit aATCM_09815Not AvailableNegative2136862 - 213721813577.0
Trna-leuNot AvailableNot AvailablePositive2137333 - 2137417Not Available
preprotein translocase subunit secgATCM_09825Not AvailableNegative2137467 - 213790114465.5
triose-phosphate isomeraseATCM_09830Not AvailableNegative2137930 - 213868526279.3
isopenicillin n synthase family oxygenaseATCM_09835Not AvailableNegative2138853 - 213979134824.2
phosphoglucosamine mutaseATCM_09840Not AvailableNegative2139865 - 214122047061.3
acetyl-coa carboxylase carboxyltransferase subunit betaATCM_09845Not AvailableNegative2141220 - 214210131965.7
tryptophan synthase subunit alphaATCM_09850Not AvailableNegative2142343 - 214314627732.1

Displaying genes 2001 – 2010 of 3762 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.