Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Stenotrophomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Stenotrophomonas |
| Species | Stenotrophomonas sp. ATCM1_4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
694774 bp
Thymine Count
680558 bp
Guanine Count
1387181 bp
Cytosine Count
1424449 bp
Genome Length
4187822 bp
Protein-coding Genes
3596 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4123 domain-containing protein | ATCM_08490 | Not Available | Negative | 1852429 - 1853394 | 36421.8 |
| type vi secretion system tip protein vgrg | ATCM_08495 | Not Available | Negative | 1853391 - 1856120 | 97177.0 |
| hypothetical protein | ATCM_08500 | Not Available | Negative | 1856248 - 1856598 | 13093.6 |
| type vi secretion system atpase tssh | ATCM_08505 | Not Available | Negative | 1856621 - 1859371 | 99978.0 |
| type vi secretion system baseplate subunit tssg | ATCM_08510 | Not Available | Negative | 1859438 - 1860529 | 40562.7 |
| type vi secretion system baseplate subunit tssf | ATCM_08515 | Not Available | Negative | 1860493 - 1862328 | 67830.1 |
| type vi secretion system baseplate subunit tsse | ATCM_08520 | Not Available | Negative | 1862328 - 1862816 | 18054.4 |
| hcp1 family type vi secretion system effector | ATCM_08525 | Not Available | Negative | 1862940 - 1863437 | 18084.3 |
| type vi secretion system contractile sheath large subunit | ATCM_08530 | Not Available | Negative | 1863581 - 1865068 | 54752.9 |
| type vi secretion system contractile sheath small subunit | ATCM_08535 | Not Available | Negative | 1865072 - 1865572 | 18591.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


