Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | DUE52_00385 | Not Available | Positive | 110409 - 111566 | 43930.6 |
| hypothetical protein | DUE52_00390 | Not Available | Negative | 111555 - 114911 | 127386.0 |
| duf1330 domain-containing protein | DUE52_00395 | Not Available | Positive | 115059 - 115361 | 11519.9 |
| ytxh domain-containing protein | DUE52_00400 | Not Available | Positive | 115482 - 115742 | 9648.59 |
| nyn domain-containing protein | DUE52_00405 | Not Available | Positive | 115852 - 116679 | 30615.2 |
| hypothetical protein | DUE52_00410 | Not Available | Negative | 116730 - 116996 | 9478.64 |
| port family protein | DUE52_00415 | Not Available | Negative | 117127 - 117705 | 21677.3 |
| yqge/algh family protein | DUE52_00420 | Not Available | Negative | 117939 - 118496 | 20912.6 |
| hypothetical protein | DUE52_00425 | Not Available | Positive | 118706 - 119998 | 47833.4 |
| pyruvate kinase | DUE52_00430 | Not Available | Negative | 120093 - 121532 | 52780.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
