Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | DUE52_00235 | Not Available | Negative | 55448 - 56833 | 51944.2 |
| hlyd family efflux transporter periplasmic adaptor subunit | DUE52_00240 | Not Available | Positive | 57177 - 58424 | 46723.8 |
| four helix bundle protein | DUE52_00245 | Not Available | Negative | 58514 - 58873 | 13625.7 |
| abc transporter atp-binding protein | DUE52_00250 | Not Available | Positive | 59000 - 59677 | 25199.4 |
| hypothetical protein | DUE52_00255 | Not Available | Positive | 59785 - 59979 | 7207.04 |
| abc transporter permease | DUE52_00260 | Not Available | Positive | 60013 - 62433 | 89124.0 |
| abc transporter permease | DUE52_00265 | Not Available | Positive | 62539 - 64956 | 89799.9 |
| abc transporter permease | DUE52_00270 | Not Available | Positive | 65151 - 67523 | 87941.0 |
| abc transporter permease | DUE52_00275 | Not Available | Positive | 67544 - 69994 | 92259.8 |
| abc transporter permease | DUE52_00280 | Not Available | Positive | 70081 - 72498 | 89884.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
