Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | DUE52_04925 | Not Available | Negative | 1217813 - 1218364 | 20667.1 |
| pas domain s-box protein | DUE52_04930 | Not Available | Negative | 1218547 - 1221585 | 114350.0 |
| class a beta-lactamase-related serine hydrolase | DUE52_04935 | Not Available | Negative | 1221658 - 1223244 | 58352.2 |
| radical sam protein | DUE52_04940 | Not Available | Positive | 1223344 - 1225542 | 82545.8 |
| duf2132 domain-containing protein | DUE52_04945 | Not Available | Positive | 1225887 - 1226108 | 8537.43 |
| glycosylase | DUE52_04950 | Not Available | Positive | 1226119 - 1227036 | 35441.8 |
| arabinan endo-1,5-alpha-l-arabinosidase | DUE52_04955 | Not Available | Positive | 1227064 - 1228071 | 37596.8 |
| hypothetical protein | DUE52_04960 | Not Available | Negative | 1228198 - 1228569 | 13665.8 |
| dsba family oxidoreductase | DUE52_04965 | Not Available | Negative | 1228594 - 1229301 | 26100.6 |
| cyclic nucleotide-binding domain-containing protein | DUE52_04970 | Not Available | Positive | 1229649 - 1230242 | 22612.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
