Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | DUE52_04875 | Not Available | Positive | 1207405 - 1208814 | 52366.1 |
| 30s ribosomal protein s16 | DUE52_04880 | Not Available | Positive | 1209101 - 1209832 | 25571.2 |
| 16s rrna processing protein rimm | DUE52_04885 | Not Available | Positive | 1209955 - 1210545 | 22146.3 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DUE52_04890 | Not Available | Positive | 1210535 - 1211209 | 25299.3 |
| penicillin-binding protein | DUE52_04895 | Not Available | Negative | 1211231 - 1213423 | 81953.9 |
| gnat family n-acetyltransferase | DUE52_04900 | Not Available | Negative | 1213489 - 1213938 | 17358.7 |
| rlua family pseudouridine synthase | DUE52_04905 | Not Available | Negative | 1214110 - 1215150 | 39468.9 |
| hypothetical protein | DUE52_04910 | Not Available | Positive | 1215291 - 1215740 | 16497.9 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | DUE52_04915 | Not Available | Positive | 1215747 - 1216628 | 32678.0 |
| aldo/keto reductase | DUE52_04920 | Not Available | Positive | 1216736 - 1217728 | 36827.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
