Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit | DUE52_04820 | Not Available | Positive | 1193391 - 1195919 | 94032.3 |
| hypothetical protein | DUE52_04825 | Not Available | Positive | 1196111 - 1197220 | 40582.6 |
| alpha/beta hydrolase | DUE52_04830 | Not Available | Negative | 1197232 - 1198155 | 34619.4 |
| hypothetical protein | DUE52_04835 | Not Available | Positive | 1198410 - 1199186 | 27993.0 |
| glycerophosphodiester phosphodiesterase | DUE52_04840 | Not Available | Negative | 1199252 - 1200025 | 29188.8 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | DUE52_04845 | Not Available | Positive | 1200224 - 1200970 | 26432.9 |
| vwa domain-containing protein | DUE52_04850 | Not Available | Positive | 1201075 - 1203159 | 77915.4 |
| duf2279 domain-containing protein | DUE52_04855 | Not Available | Positive | 1203146 - 1204132 | 37906.7 |
| dna mismatch repair protein muts | DUE52_04860 | Not Available | Positive | 1204148 - 1205161 | 37519.2 |
| duf4403 family protein | DUE52_04865 | Not Available | Positive | 1205109 - 1206578 | 55332.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
