Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mucoidy inhibitor muia family protein | DUE52_04770 | Not Available | Negative | 1182583 - 1184202 | 59863.0 |
| ldh family oxidoreductase | DUE52_04775 | Not Available | Positive | 1184378 - 1185448 | 37872.4 |
| endolytic transglycosylase mltg | DUE52_04780 | Not Available | Positive | 1185491 - 1186528 | 39943.1 |
| acyl-coa thioesterase | DUE52_04785 | Not Available | Positive | 1186614 - 1187033 | 16407.8 |
| yihy/virulence factor brkb family protein | DUE52_04790 | Not Available | Positive | 1187060 - 1188013 | 35475.2 |
| glycosyltransferase | DUE52_04795 | Not Available | Positive | 1188273 - 1189319 | 40611.6 |
| threonylcarbamoyl-amp synthase | DUE52_04800 | Not Available | Positive | 1189488 - 1190108 | 23321.3 |
| hypothetical protein | DUE52_04805 | Not Available | Positive | 1190497 - 1191369 | 33093.3 |
| lipid a biosynthesis acyltransferase | DUE52_04810 | Not Available | Negative | 1191681 - 1192556 | 34212.6 |
| hypothetical protein | DUE52_04815 | Not Available | Positive | 1192672 - 1193325 | 25305.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
