Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2911 domain-containing protein | DUE52_04720 | Not Available | Positive | 1173587 - 1174102 | 18984.9 |
| hypothetical protein | DUE52_04725 | Not Available | Positive | 1174339 - 1174965 | 23125.2 |
| arac family transcriptional regulator | DUE52_04730 | Not Available | Positive | 1175006 - 1176043 | 38048.6 |
| duf4260 family protein | DUE52_04735 | Not Available | Negative | 1175979 - 1176398 | 15266.9 |
| duf1569 domain-containing protein | DUE52_04740 | Not Available | Negative | 1176513 - 1176971 | 17969.8 |
| duf4180 domain-containing protein | DUE52_04745 | Not Available | Negative | 1177029 - 1177385 | 13498.2 |
| nad-dependent epimerase/dehydratase family protein | DUE52_04750 | Not Available | Negative | 1177404 - 1178324 | 34585.4 |
| fmn-binding glutamate synthase family protein | DUE52_04755 | Not Available | Negative | 1178784 - 1180322 | 56102.5 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DUE52_04760 | Not Available | Negative | 1180420 - 1181658 | 45041.9 |
| hypothetical protein | DUE52_04765 | Not Available | Negative | 1181855 - 1182448 | 22934.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
