Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DUE52_04670 | Not Available | Negative | 1161742 - 1164615 | 107243.0 |
| glpgli family protein | DUE52_04675 | Not Available | Negative | 1164625 - 1165470 | 30991.0 |
| sensor histidine kinase | DUE52_04680 | Not Available | Positive | 1165609 - 1167090 | 56445.1 |
| dna-binding response regulator | DUE52_04685 | Not Available | Positive | 1167214 - 1167891 | 25607.0 |
| type ii toxin-antitoxin system vapc family toxin | DUE52_04690 | Not Available | Negative | 1167942 - 1168352 | 15829.3 |
| hypothetical protein | DUE52_04695 | Not Available | Negative | 1168678 - 1169484 | 30809.8 |
| hypothetical protein | DUE52_04700 | Not Available | Negative | 1169547 - 1171229 | 58971.7 |
| hypothetical protein | DUE52_04705 | Not Available | Negative | 1171241 - 1171420 | 6627.79 |
| cobalamin-binding protein | DUE52_04710 | Not Available | Positive | 1171457 - 1172206 | 28451.1 |
| hypothetical protein | DUE52_04715 | Not Available | Negative | 1172198 - 1173466 | 47856.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
