Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | DUE52_04620 | Not Available | Positive | 1144778 - 1145968 | 45847.6 |
| tonb-dependent receptor | DUE52_04625 | Not Available | Positive | 1146068 - 1148419 | 86759.9 |
| m42 family peptidase | DUE52_04630 | Not Available | Positive | 1148593 - 1149678 | 40019.6 |
| duf4249 domain-containing protein | DUE52_04635 | Not Available | Negative | 1149867 - 1150778 | 33765.2 |
| tonb-dependent receptor | DUE52_04640 | Not Available | Negative | 1150784 - 1153471 | 100413.0 |
| duf4974 domain-containing protein | DUE52_04645 | Not Available | Negative | 1153468 - 1154487 | 37984.7 |
| sigma-70 family rna polymerase sigma factor | DUE52_04650 | Not Available | Negative | 1154546 - 1155151 | 23384.1 |
| fasciclin domain-containing protein | DUE52_04655 | Not Available | Positive | 1155617 - 1156582 | 32554.8 |
| duf1501 domain-containing protein | DUE52_04660 | Not Available | Negative | 1156668 - 1158107 | 53797.3 |
| duf1553 domain-containing protein | DUE52_04665 | Not Available | Negative | 1158199 - 1161543 | 125949.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
