Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_04520 | Not Available | Positive | 1119481 - 1120362 | 33338.7 |
| glycosyltransferase | DUE52_04525 | Not Available | Positive | 1120415 - 1121314 | 34754.7 |
| t9ss c-terminal target domain-containing protein | DUE52_04530 | Not Available | Negative | 1121567 - 1124908 | 120456.0 |
| circularly permuted type 2 atp-grasp protein | DUE52_04535 | Not Available | Negative | 1125150 - 1126634 | 55772.7 |
| hypothetical protein | DUE52_04540 | Not Available | Positive | 1126885 - 1128408 | 56516.4 |
| hypothetical protein | DUE52_04545 | Not Available | Negative | 1128413 - 1129978 | 59801.0 |
| uma2 family endonuclease | DUE52_04550 | Not Available | Positive | 1130089 - 1130643 | 21258.4 |
| atp-dependent protease atpase subunit hslu | DUE52_04555 | Not Available | Negative | 1130707 - 1132104 | 52370.4 |
| hypothetical protein | DUE52_04560 | Not Available | Negative | 1132244 - 1133266 | 36626.1 |
| hypothetical protein | DUE52_04565 | Not Available | Positive | 1133822 - 1134670 | 30180.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
