Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transferase | DUE52_04470 | Not Available | Positive | 1107538 - 1108197 | 25312.2 |
| capsular biosynthesis protein | DUE52_04475 | Not Available | Positive | 1108336 - 1110633 | 85966.2 |
| nucleotide-diphospho-sugar transferase | DUE52_04480 | Not Available | Positive | 1110690 - 1111619 | 36644.4 |
| hypothetical protein | DUE52_04485 | Not Available | Positive | 1111619 - 1112929 | 48491.3 |
| glycosyltransferase | DUE52_04490 | Not Available | Positive | 1112926 - 1114089 | 43643.3 |
| o-antigen ligase domain-containing protein | DUE52_04495 | Not Available | Positive | 1114079 - 1115620 | 57464.1 |
| glycosyltransferase family 2 protein | DUE52_04500 | Not Available | Positive | 1115633 - 1116511 | 33136.0 |
| glycosyltransferase | DUE52_04505 | Not Available | Positive | 1116539 - 1117657 | 42110.3 |
| glycosyltransferase | DUE52_04510 | Not Available | Positive | 1117665 - 1118453 | 29393.6 |
| gfo/idh/moca family oxidoreductase | DUE52_04515 | Not Available | Positive | 1118446 - 1119468 | 38115.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
