Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (r)-s-oxide reductase | DUE52_04420 | Not Available | Negative | 1096569 - 1097057 | 17913.6 |
| fasciclin domain-containing protein | DUE52_04425 | Not Available | Negative | 1097155 - 1097709 | 19005.4 |
| anti-sigma factor | DUE52_04430 | Not Available | Negative | 1098084 - 1098959 | 32446.2 |
| rna polymerase sigma factor | DUE52_04435 | Not Available | Negative | 1098956 - 1099504 | 21104.3 |
| hypothetical protein | DUE52_04440 | Not Available | Negative | 1099672 - 1100106 | 15725.9 |
| diaminopimelate decarboxylase | DUE52_04445 | Not Available | Positive | 1100153 - 1101412 | 46813.1 |
| yebc/pmpr family dna-binding transcriptional regulator | DUE52_04450 | Not Available | Positive | 1101490 - 1102203 | 26875.9 |
| hypothetical protein | DUE52_04455 | Not Available | Negative | 1102238 - 1102477 | 9502.27 |
| gliding motility-associated c-terminal domain-containing protein | DUE52_04460 | Not Available | Negative | 1102615 - 1105491 | 105156.0 |
| glycosyltransferase family 2 protein | DUE52_04465 | Not Available | Negative | 1105693 - 1106679 | 38101.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
