Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_04320 | Not Available | Positive | 1074726 - 1075931 | 46274.6 |
| hypothetical protein | DUE52_04325 | Not Available | Negative | 1075932 - 1076612 | 24874.2 |
| hypothetical protein | DUE52_04330 | Not Available | Positive | 1076742 - 1078148 | 50743.2 |
| ecsc family protein | DUE52_04335 | Not Available | Positive | 1078170 - 1078913 | 28682.1 |
| hypothetical protein | DUE52_04340 | Not Available | Negative | 1079042 - 1079632 | 21538.0 |
| peptidylprolyl isomerase | DUE52_04345 | Not Available | Negative | 1079741 - 1080211 | 16910.8 |
| fasciclin domain-containing protein | DUE52_04350 | Not Available | Positive | 1080436 - 1081101 | 22510.7 |
| rrf2 family transcriptional regulator | DUE52_04355 | Not Available | Negative | 1081429 - 1081890 | 16844.5 |
| iron-sulfur cluster repair di-iron protein | DUE52_04360 | Not Available | Negative | 1081986 - 1082714 | 26896.6 |
| cytochrome c | DUE52_04365 | Not Available | Positive | 1082918 - 1083382 | 17151.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
