Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | DUE52_04270 | Not Available | Positive | 1066342 - 1066980 | 24092.7 |
| nlpc/p60 family protein | DUE52_04275 | Not Available | Negative | 1067075 - 1067641 | 20787.0 |
| rna-binding transcriptional accessory protein | DUE52_04280 | Not Available | Negative | 1067729 - 1069861 | 79505.5 |
| cold shock domain-containing protein | DUE52_04285 | Not Available | Negative | 1070034 - 1070225 | 7040.42 |
| hypothetical protein | DUE52_04290 | Not Available | Negative | 1070412 - 1070645 | 8566.32 |
| gdp-mannose pyrophosphatase nudk | DUE52_04295 | Not Available | Negative | 1071223 - 1071804 | 21986.0 |
| deor/glpr transcriptional regulator | DUE52_04300 | Not Available | Positive | 1071863 - 1072615 | 27677.5 |
| hypothetical protein | DUE52_04305 | Not Available | Negative | 1072612 - 1072911 | 11316.4 |
| hypothetical protein | DUE52_04310 | Not Available | Negative | 1073070 - 1073447 | 13565.2 |
| mbl fold metallo-hydrolase | DUE52_04315 | Not Available | Positive | 1073616 - 1074578 | 35218.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
