Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | DUE52_04220 | Not Available | Negative | 1058029 - 1059699 | 62533.3 |
| glycoside hydrolase | DUE52_04225 | Not Available | Negative | 1059711 - 1060376 | 25955.0 |
| peroxiredoxin | DUE52_04230 | Not Available | Negative | 1060701 - 1061336 | 23419.8 |
| dna-binding response regulator | DUE52_04235 | Not Available | Negative | 1061474 - 1062109 | 23963.3 |
| histidine kinase | DUE52_04240 | Not Available | Negative | 1062099 - 1063520 | 53808.6 |
| duf3299 domain-containing protein | DUE52_04245 | Not Available | Positive | 1063790 - 1064275 | 18031.9 |
| Trna-ala | Not Available | Not Available | Positive | 1064391 - 1064467 | Not Available |
| sigma-70 family rna polymerase sigma factor | DUE52_04255 | Not Available | Positive | 1064693 - 1065250 | 21805.9 |
| hypothetical protein | DUE52_04260 | Not Available | Positive | 1065255 - 1065473 | 8580.42 |
| atp-dependent clp protease proteolytic subunit | DUE52_04265 | Not Available | Positive | 1065587 - 1066264 | 25237.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
