Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:proton antiporter | DUE52_04120 | Not Available | Positive | 1033909 - 1035231 | 48213.1 |
| tat pathway signal protein | DUE52_04125 | Not Available | Negative | 1035257 - 1036555 | 49616.0 |
| energy transducer tonb | DUE52_04130 | Not Available | Positive | 1036768 - 1037589 | 30453.5 |
| carboxynorspermidine decarboxylase | DUE52_04135 | Not Available | Positive | 1037717 - 1038850 | 42352.6 |
| amino acid abc transporter substrate-binding protein | DUE52_04140 | Not Available | Positive | 1039004 - 1040215 | 42251.6 |
| pyrroloquinoline quinone-dependent dehydrogenase | DUE52_04145 | Not Available | Negative | 1040254 - 1042440 | 79508.3 |
| hypothetical protein | DUE52_04150 | Not Available | Negative | 1042501 - 1042782 | 10801.8 |
| dihydrofolate reductase | DUE52_04155 | Not Available | Negative | 1042834 - 1043538 | 26502.8 |
| voc family protein | DUE52_04160 | Not Available | Negative | 1043519 - 1043950 | 15749.8 |
| helix-turn-helix domain-containing protein | DUE52_04165 | Not Available | Positive | 1044089 - 1045069 | 36564.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
