Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family phosphatase | DUE52_04020 | Not Available | Positive | 1015083 - 1015748 | 25003.9 |
| site-2 protease family protein | DUE52_04025 | Not Available | Positive | 1015711 - 1016856 | 43201.1 |
| glycerol acyltransferase | DUE52_04030 | Not Available | Positive | 1016891 - 1017457 | 21765.6 |
| lipid-a-disaccharide synthase | DUE52_04035 | Not Available | Negative | 1017446 - 1018558 | 41605.6 |
| 6-carboxytetrahydropterin synthase | DUE52_04040 | Not Available | Negative | 1018562 - 1018978 | 15934.1 |
| adp-glyceromanno-heptose 6-epimerase | DUE52_04045 | Not Available | Positive | 1019289 - 1020254 | 37547.6 |
| peptidase s8 | DUE52_04050 | Not Available | Negative | 1020291 - 1021829 | 56058.0 |
| m24 family metallopeptidase | DUE52_04055 | Not Available | Positive | 1021914 - 1023215 | 50344.2 |
| tetr/acrr family transcriptional regulator | DUE52_04060 | Not Available | Negative | 1023262 - 1023909 | 24448.7 |
| hypothetical protein | DUE52_04065 | Not Available | Negative | 1024059 - 1024490 | 16519.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
