Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | DUE52_03970 | Not Available | Positive | 1002779 - 1003525 | 28375.2 |
| duf2236 domain-containing protein | DUE52_03975 | Not Available | Positive | 1003665 - 1004435 | 30084.5 |
| fad-dependent oxidoreductase | DUE52_03980 | Not Available | Negative | 1004575 - 1006317 | 64078.0 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | DUE52_03985 | Not Available | Positive | 1006482 - 1008155 | 58321.4 |
| atp-dependent protease subunit hslv | DUE52_03990 | Not Available | Positive | 1008258 - 1008797 | 19309.4 |
| histidine kinase | DUE52_03995 | Not Available | Positive | 1008847 - 1010337 | 56053.9 |
| response regulator | DUE52_04000 | Not Available | Positive | 1010291 - 1010746 | 17435.7 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | DUE52_04005 | Not Available | Negative | 1010758 - 1012329 | 55530.7 |
| mbl fold metallo-hydrolase | DUE52_04010 | Not Available | Positive | 1012533 - 1013978 | 54024.5 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | DUE52_04015 | Not Available | Positive | 1014118 - 1015071 | 36012.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
