Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate:quinone oxidoreductase | DUE52_03920 | Not Available | Negative | 991070 - 992587 | 56051.3 |
| n-acetyltransferase | DUE52_03925 | Not Available | Negative | 992731 - 993285 | 20879.1 |
| trpb-like pyridoxal phosphate-dependent enzyme | DUE52_03930 | Not Available | Negative | 993391 - 994755 | 49790.0 |
| gnat family n-acetyltransferase | DUE52_03935 | Not Available | Positive | 994817 - 995242 | 16136.2 |
| polysaccharide deacetylase family protein | DUE52_03940 | Not Available | Negative | 995295 - 996221 | 34316.9 |
| duf3817 domain-containing protein | DUE52_03945 | Not Available | Negative | 996354 - 996668 | 11845.9 |
| fe-s cluster assembly protein sufb | DUE52_03950 | Not Available | Negative | 996916 - 998361 | 53712.7 |
| winged helix-turn-helix transcriptional regulator | DUE52_03955 | Not Available | Negative | 998519 - 999007 | 18467.6 |
| duf819 family protein | DUE52_03960 | Not Available | Positive | 999497 - 1000723 | 43167.6 |
| elongation factor 4 | DUE52_03965 | Not Available | Positive | 1000906 - 1002693 | 66761.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
