Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DUE52_03870 | Not Available | Negative | 979208 - 980113 | 34440.3 |
| duf3471 domain-containing protein | DUE52_03875 | Not Available | Positive | 980321 - 982051 | 64287.2 |
| magnesium and cobalt transport protein cora | DUE52_03880 | Not Available | Positive | 982081 - 983031 | 37137.5 |
| mechanosensitive ion channel family protein | DUE52_03885 | Not Available | Positive | 983227 - 984072 | 30138.0 |
| endonuclease | DUE52_03890 | Not Available | Negative | 984267 - 985256 | 37295.2 |
| (2fe-2s)-binding protein | DUE52_03895 | Not Available | Positive | 985313 - 985840 | 18847.6 |
| xanthine dehydrogenase family protein subunit m | DUE52_03900 | Not Available | Positive | 985845 - 986855 | 36481.5 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | DUE52_03905 | Not Available | Positive | 986852 - 989083 | 81291.5 |
| hypothetical protein | DUE52_03910 | Not Available | Positive | 989152 - 990492 | 50817.6 |
| duf1905 domain-containing protein | DUE52_03915 | Not Available | Negative | 990586 - 991056 | 17783.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
