Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DUE52_03820 | Not Available | Positive | 969921 - 970829 | 34833.8 |
| 1,4-beta-xylanase | DUE52_03825 | Not Available | Positive | 970894 - 971973 | 40982.6 |
| blab/ind/mus family subclass b1 metallo-beta-lactamase | DUE52_03830 | Not Available | Positive | 972261 - 972998 | 28189.8 |
| type i methionyl aminopeptidase | DUE52_03835 | Not Available | Positive | 973058 - 973819 | 27944.3 |
| nuclear transport factor 2 family protein | DUE52_03840 | Not Available | Positive | 973947 - 974291 | 12907.3 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_03845 | Not Available | Positive | 974420 - 975412 | 35395.0 |
| arac family transcriptional regulator | DUE52_03850 | Not Available | Positive | 975729 - 976547 | 31519.0 |
| mbl fold metallo-hydrolase | DUE52_03855 | Not Available | Positive | 976590 - 977636 | 39651.6 |
| hypothetical protein | DUE52_03860 | Not Available | Positive | 977639 - 978268 | 23754.8 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_03865 | Not Available | Negative | 978341 - 979105 | 27109.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
