Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | DUE52_03720 | Not Available | Positive | 949131 - 949970 | 31007.6 |
| arac family transcriptional regulator | DUE52_03725 | Not Available | Negative | 950003 - 950872 | 32982.8 |
| duf1080 domain-containing protein | DUE52_03730 | Not Available | Positive | 950996 - 951730 | 27143.4 |
| gfo/idh/moca family oxidoreductase | DUE52_03735 | Not Available | Positive | 951727 - 953097 | 50228.2 |
| hypothetical protein | DUE52_03740 | Not Available | Positive | 953116 - 954021 | 33721.9 |
| phytanoyl-coa dioxygenase family protein | DUE52_03745 | Not Available | Positive | 954082 - 954873 | 29705.2 |
| sugar phosphate isomerase/epimerase | DUE52_03750 | Not Available | Positive | 954885 - 955688 | 30791.3 |
| hypothetical protein | DUE52_03755 | Not Available | Positive | 956006 - 957211 | 46722.9 |
| amidohydrolase | DUE52_03760 | Not Available | Positive | 957744 - 960794 | 111811.0 |
| amidohydrolase | DUE52_03765 | Not Available | Positive | 960940 - 962244 | 47182.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
