Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | DUE52_03670 | Not Available | Negative | 935810 - 936322 | 19189.0 |
| arac family transcriptional regulator | DUE52_03675 | Not Available | Negative | 936381 - 937250 | 32718.2 |
| glycoside hydrolase family 127 protein | DUE52_03680 | Not Available | Negative | 937421 - 939376 | 72500.7 |
| exodeoxyribonuclease v | DUE52_03685 | Not Available | Negative | 939389 - 942733 | 128306.0 |
| hypothetical protein | DUE52_03690 | Not Available | Negative | 942868 - 943401 | 19660.6 |
| histidinol-phosphate transaminase | DUE52_03695 | Not Available | Negative | 943417 - 944529 | 40704.2 |
| histidinol dehydrogenase | DUE52_03700 | Not Available | Negative | 944797 - 946065 | 45257.6 |
| atp phosphoribosyltransferase | DUE52_03705 | Not Available | Negative | 946158 - 947018 | 31155.5 |
| glycosylasparaginase | DUE52_03710 | Not Available | Negative | 947141 - 948184 | 37261.8 |
| hypothetical protein | DUE52_03715 | Not Available | Negative | 948269 - 949033 | 28501.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
