Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_03570 | Not Available | Negative | 906540 - 907154 | 21636.1 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_03575 | Not Available | Negative | 907296 - 908882 | 57786.4 |
| susc/raga family tonb-linked outer membrane protein | DUE52_03580 | Not Available | Negative | 908919 - 912128 | 116807.0 |
| mosc domain-containing protein | DUE52_03585 | Not Available | Positive | 912573 - 913082 | 18427.5 |
| had family phosphatase | DUE52_03590 | Not Available | Negative | 913049 - 913723 | 25119.8 |
| mfs transporter | DUE52_03595 | Not Available | Negative | 913903 - 915096 | 41232.2 |
| arac family transcriptional regulator | DUE52_03600 | Not Available | Positive | 915244 - 916092 | 32792.3 |
| nudix hydrolase | DUE52_03605 | Not Available | Positive | 916172 - 916852 | 26232.3 |
| ribose-phosphate pyrophosphokinase | DUE52_03610 | Not Available | Positive | 916952 - 917797 | 30605.0 |
| nicotinate phosphoribosyltransferase | DUE52_03615 | Not Available | Positive | 917794 - 919254 | 54562.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
