Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-2,3-diacylglucosamine diphosphatase | DUE52_03470 | Not Available | Negative | 881242 - 882027 | 30584.4 |
| acetyltransferase | DUE52_03475 | Not Available | Positive | 882142 - 882777 | 22065.6 |
| alpha/beta hydrolase | DUE52_03480 | Not Available | Positive | 883093 - 883905 | 30528.4 |
| alpha/beta fold hydrolase | DUE52_03485 | Not Available | Positive | 884004 - 884807 | 29054.2 |
| alpha/beta hydrolase | DUE52_03490 | Not Available | Positive | 884838 - 885833 | 36061.1 |
| hypothetical protein | DUE52_03495 | Not Available | Positive | 886033 - 888336 | 88051.0 |
| response regulator | DUE52_03500 | Not Available | Negative | 888341 - 890827 | 92159.4 |
| arac family transcriptional regulator | DUE52_03505 | Not Available | Positive | 891111 - 891959 | 32546.4 |
| gdp-l-fucose synthase | DUE52_03510 | Not Available | Negative | 892068 - 893009 | 35443.2 |
| hypothetical protein | DUE52_03515 | Not Available | Positive | 893314 - 894066 | 29973.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
