Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_03420 | Not Available | Positive | 860624 - 861100 | 18403.9 |
| endopeptidase la | DUE52_03425 | Not Available | Positive | 861310 - 863832 | 94611.4 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_03430 | Not Available | Negative | 864004 - 865530 | 55895.2 |
| susc/raga family tonb-linked outer membrane protein | DUE52_03435 | Not Available | Negative | 865553 - 868786 | 119001.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_03440 | Not Available | Negative | 869481 - 870932 | 52923.2 |
| susc/raga family tonb-linked outer membrane protein | DUE52_03445 | Not Available | Negative | 870956 - 874162 | 116043.0 |
| rna methyltransferase | DUE52_03450 | Not Available | Positive | 874450 - 875823 | 51303.6 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_03455 | Not Available | Positive | 875934 - 876767 | 30374.4 |
| nuclease sbccd subunit c | DUE52_03460 | Not Available | Negative | 876851 - 879931 | 117279.0 |
| exonuclease subunit sbcd | DUE52_03465 | Not Available | Negative | 879903 - 881165 | 47664.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
