Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3'-5' exonuclease | DUE52_03370 | Not Available | Negative | 848713 - 849522 | 30851.6 |
| glycerol kinase | DUE52_03375 | Not Available | Negative | 849631 - 851130 | 55081.2 |
| hypothetical protein | DUE52_03380 | Not Available | Negative | 851538 - 852044 | 19024.0 |
| rod shape-determining protein mrec | DUE52_03385 | Not Available | Negative | 852060 - 852899 | 31924.2 |
| rod shape-determining protein | DUE52_03390 | Not Available | Negative | 852998 - 854023 | 36965.3 |
| hypothetical protein | DUE52_03395 | Not Available | Positive | 854241 - 855743 | 57270.6 |
| hypothetical protein | DUE52_03400 | Not Available | Positive | 855747 - 857087 | 51032.6 |
| hypothetical protein | DUE52_03405 | Not Available | Positive | 857093 - 857683 | 23023.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | DUE52_03410 | Not Available | Positive | 857676 - 858845 | 42778.9 |
| rip metalloprotease rsep | DUE52_03415 | Not Available | Positive | 859192 - 860529 | 48863.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
