Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma | DUE52_03270 | Not Available | Positive | 827168 - 827782 | 23779.9 |
| hypothetical protein | DUE52_03275 | Not Available | Positive | 827930 - 828166 | 8930.88 |
| guanylate kinase | DUE52_03280 | Not Available | Positive | 828173 - 828772 | 22708.9 |
| nicotinate-nucleotide adenylyltransferase | DUE52_03285 | Not Available | Positive | 828809 - 829381 | 22028.6 |
| xcyi family restriction endonuclease | DUE52_03290 | Not Available | Negative | 829410 - 830372 | 36072.3 |
| site-specific dna-methyltransferase | DUE52_03295 | Not Available | Negative | 830362 - 831222 | 33135.0 |
| hypothetical protein | DUE52_03300 | Not Available | Negative | 831370 - 831723 | 13168.8 |
| peptidase | DUE52_03305 | Not Available | Negative | 831794 - 832792 | 36597.3 |
| cysteine--trna ligase | DUE52_03310 | Not Available | Negative | 832813 - 834312 | 56925.0 |
| sugar kinase | DUE52_03315 | Not Available | Positive | 834500 - 835414 | 33404.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
