Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_03220 | Not Available | Negative | 819643 - 820554 | 35197.2 |
| site-specific integrase | DUE52_03225 | Not Available | Negative | 820571 - 821893 | 50316.0 |
| hypothetical protein | DUE52_03230 | Not Available | Negative | 822388 - 823413 | 39220.0 |
| amidohydrolase | DUE52_03235 | Not Available | Positive | 823630 - 824592 | 36108.2 |
| duf805 domain-containing protein | DUE52_03240 | Not Available | Negative | 824683 - 825075 | 14521.7 |
| hsp20/alpha crystallin family protein | DUE52_03245 | Not Available | Negative | 825323 - 825772 | 17110.0 |
| hypothetical protein | DUE52_03250 | Not Available | Positive | 825809 - 825994 | 6912.26 |
| osmc family peroxiredoxin | DUE52_03255 | Not Available | Positive | 826077 - 826475 | 14199.8 |
| hypothetical protein | DUE52_03260 | Not Available | Positive | 826565 - 826870 | 11574.9 |
| hypothetical protein | DUE52_03265 | Not Available | Negative | 826889 - 827092 | 7844.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
