Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | DUE52_03170 | Not Available | Negative | 807433 - 809421 | 73860.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_03175 | Not Available | Negative | 809523 - 810986 | 53303.1 |
| tonb-dependent receptor | DUE52_03180 | Not Available | Negative | 810999 - 814367 | 122606.0 |
| duf4974 domain-containing protein | DUE52_03185 | Not Available | Negative | 814468 - 815577 | 42143.4 |
| rna polymerase sigma-70 factor | DUE52_03190 | Not Available | Positive | 815597 - 816184 | 22904.4 |
| hypothetical protein | DUE52_03195 | Not Available | Negative | 816411 - 816752 | 12934.7 |
| hypothetical protein | DUE52_03200 | Not Available | Positive | 817352 - 817573 | 9056.28 |
| hypothetical protein | DUE52_03205 | Not Available | Negative | 817696 - 817992 | 11172.3 |
| hypothetical protein | DUE52_03210 | Not Available | Negative | 818192 - 819094 | 35292.3 |
| hypothetical protein | DUE52_03215 | Not Available | Negative | 819261 - 819551 | 11087.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
