Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit alpha | DUE52_31930 | Not Available | Positive | 7983078 - 7983893 | 30452.6 |
| hypothetical protein | DUE52_31935 | Not Available | Positive | 7984541 - 7985386 | 31692.7 |
| glycoside hydrolase | DUE52_31940 | Not Available | Negative | 7985452 - 7986444 | 37255.8 |
| dna-binding response regulator | DUE52_31945 | Not Available | Positive | 7986718 - 7987422 | 26751.4 |
| ghkl domain-containing protein | DUE52_31950 | Not Available | Positive | 7987440 - 7988474 | 38949.7 |
| transposase | DUE52_31965 | Not Available | Positive | 7992044 - 7992158 | 4334.3 |
| abc transporter permease | DUE52_31970 | Not Available | Positive | 7992203 - 7994875 | 99231.9 |
| is21 family transposase | DUE52_31975 | Not Available | Positive | 7995171 - 7996718 | 59854.9 |
| atp-binding protein | DUE52_31980 | Not Available | Positive | 7996762 - 7997508 | 28314.3 |
| is256 family transposase | DUE52_31990 | Not Available | Negative | 7999229 - 8000449 | 46559.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
