Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_31875 | Not Available | Positive | 7975344 - 7975769 | 15944.3 |
| transposase | DUE52_31880 | Not Available | Negative | 7975849 - 7975941 | 3668.5 |
| Trna-pro | Not Available | Not Available | Positive | 7976140 - 7976213 | Not Available |
| anthranilate synthase component i family protein | DUE52_31895 | Not Available | Positive | 7976397 - 7977839 | 54805.8 |
| aminodeoxychorismate/anthranilate synthase component ii | DUE52_31900 | Not Available | Positive | 7977853 - 7978419 | 21091.2 |
| class i sam-dependent methyltransferase | DUE52_31905 | Not Available | Positive | 7978416 - 7979090 | 25604.3 |
| anthranilate phosphoribosyltransferase | DUE52_31910 | Not Available | Positive | 7979118 - 7980107 | 36179.9 |
| indole-3-glycerol phosphate synthase trpc | DUE52_31915 | Not Available | Positive | 7980177 - 7981001 | 30499.5 |
| phosphoribosylanthranilate isomerase | DUE52_31920 | Not Available | Positive | 7980998 - 7981645 | 24345.2 |
| tryptophan synthase subunit beta | DUE52_31925 | Not Available | Positive | 7981799 - 7983001 | 43416.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
