Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_31825 | Not Available | Negative | 7959197 - 7961581 | 88852.1 |
| atp-binding protein | DUE52_31830 | Not Available | Negative | 7961584 - 7962681 | 40717.1 |
| hypothetical protein | DUE52_31835 | Not Available | Positive | 7963671 - 7964702 | 40881.2 |
| duf2813 domain-containing protein | DUE52_31840 | Not Available | Positive | 7964856 - 7965950 | 43022.3 |
| aspartate-semialdehyde dehydrogenase | DUE52_31845 | Not Available | Positive | 7966578 - 7967570 | 36001.2 |
| tonb-dependent receptor | DUE52_31850 | Not Available | Positive | 7967813 - 7970533 | 101718.0 |
| hypothetical protein | DUE52_31855 | Not Available | Negative | 7970799 - 7971215 | 16242.9 |
| nad(p)-dependent alcohol dehydrogenase | DUE52_31860 | Not Available | Positive | 7971810 - 7972853 | 37752.5 |
| sugar phosphate isomerase/epimerase | DUE52_31865 | Not Available | Negative | 7972881 - 7973819 | 34950.3 |
| gfo/idh/moca family oxidoreductase | DUE52_31870 | Not Available | Negative | 7973825 - 7975084 | 46387.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
