Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imma/irre family metallo-endopeptidase | DUE52_03115 | Not Available | Positive | 791517 - 792428 | 36180.4 |
| hypothetical protein | DUE52_03120 | Not Available | Negative | 792506 - 794056 | 60143.1 |
| class i sam-dependent methyltransferase | DUE52_03125 | Not Available | Negative | 794148 - 795797 | 62758.7 |
| endonuclease | DUE52_03130 | Not Available | Negative | 795800 - 798871 | 116629.0 |
| hypothetical protein | DUE52_03135 | Not Available | Positive | 799940 - 800215 | 10433.7 |
| duf262 domain-containing protein | DUE52_03140 | Not Available | Positive | 800299 - 802092 | 68185.4 |
| hypothetical protein | DUE52_03145 | Not Available | Positive | 802331 - 802558 | 8754.39 |
| hypothetical protein | DUE52_03150 | Not Available | Positive | 802707 - 803933 | 45505.4 |
| caspase family protein | DUE52_03155 | Not Available | Positive | 803930 - 805069 | 42636.5 |
| hypothetical protein | DUE52_03160 | Not Available | Positive | 805074 - 806366 | 48781.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
