Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_31620 | Not Available | Positive | 7911545 - 7913023 | 54208.1 |
| hypothetical protein | DUE52_31625 | Not Available | Negative | 7913070 - 7914077 | 35646.2 |
| voc family protein | DUE52_31630 | Not Available | Positive | 7914256 - 7914645 | 14628.4 |
| hypothetical protein | DUE52_31635 | Not Available | Positive | 7914729 - 7915202 | 17125.9 |
| hypothetical protein | DUE52_31640 | Not Available | Positive | 7915280 - 7915591 | 11316.6 |
| phospholipid carrier-dependent glycosyltransferase | DUE52_31645 | Not Available | Positive | 7915799 - 7917340 | 59628.5 |
| glycosyltransferase | DUE52_31650 | Not Available | Positive | 7917389 - 7918333 | 35546.0 |
| upf0104 family protein | DUE52_31655 | Not Available | Positive | 7918337 - 7919212 | 31870.9 |
| sdr family nad(p)-dependent oxidoreductase | DUE52_31660 | Not Available | Positive | 7919209 - 7920177 | 35835.6 |
| branched-chain amino acid aminotransferase | DUE52_31665 | Not Available | Negative | 7920241 - 7921314 | 40006.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
