Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DUE52_31520 | Not Available | Positive | 7891694 - 7893469 | 67803.1 |
| hypothetical protein | DUE52_31525 | Not Available | Negative | 7893534 - 7894640 | 42366.0 |
| hypothetical protein | DUE52_31530 | Not Available | Positive | 7894816 - 7895430 | 22087.5 |
| hypothetical protein | DUE52_31535 | Not Available | Positive | 7895549 - 7896109 | 20599.2 |
| methylmalonyl co-a mutase-associated gtpase meab | DUE52_31540 | Not Available | Negative | 7896168 - 7897181 | 36545.9 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DUE52_31545 | Not Available | Negative | 7897246 - 7897926 | 25087.2 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DUE52_31550 | Not Available | Negative | 7898008 - 7899051 | 39326.3 |
| hypothetical protein | DUE52_31555 | Not Available | Negative | 7899240 - 7899611 | 13730.9 |
| duf1080 domain-containing protein | DUE52_31560 | Not Available | Negative | 7899776 - 7900444 | 25049.7 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_31565 | Not Available | Positive | 7900859 - 7901160 | 11626.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
