Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | DUE52_31470 | Not Available | Positive | 7874623 - 7875270 | 23875.2 |
| histidine kinase | DUE52_31475 | Not Available | Positive | 7875478 - 7877253 | 67367.9 |
| tonb-dependent receptor | DUE52_31480 | Not Available | Positive | 7877514 - 7880732 | 116400.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_31485 | Not Available | Positive | 7880826 - 7882394 | 57781.4 |
| cell shape determination protein ccma | DUE52_31490 | Not Available | Positive | 7882485 - 7883567 | 38864.7 |
| mannan endo-1,4-beta-mannosidase | DUE52_31495 | Not Available | Positive | 7883722 - 7885158 | 53131.5 |
| sialate o-acetylesterase | DUE52_31500 | Not Available | Negative | 7885167 - 7887092 | 70900.8 |
| hypothetical protein | DUE52_31505 | Not Available | Positive | 7887222 - 7887476 | 9774.71 |
| collagen-like protein | DUE52_31510 | Not Available | Negative | 7887495 - 7888079 | 21155.0 |
| tonb-dependent receptor | DUE52_31515 | Not Available | Positive | 7888483 - 7891671 | 117982.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
