Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_31420 | Not Available | Negative | 7852058 - 7853509 | 52834.9 |
| susc/raga family tonb-linked outer membrane protein | DUE52_31425 | Not Available | Negative | 7853567 - 7856812 | 116605.0 |
| amidohydrolase | DUE52_31430 | Not Available | Positive | 7857528 - 7860539 | 110126.0 |
| heme-binding protein | DUE52_31435 | Not Available | Negative | 7860560 - 7863982 | 124400.0 |
| lanthionine synthetase | DUE52_31440 | Not Available | Negative | 7864088 - 7865293 | 44881.1 |
| hlyd family efflux transporter periplasmic adaptor subunit | DUE52_31445 | Not Available | Negative | 7865307 - 7866578 | 47931.4 |
| peptidase domain-containing abc transporter | DUE52_31450 | Not Available | Negative | 7866583 - 7868817 | 85515.5 |
| hypothetical protein | DUE52_31455 | Not Available | Negative | 7868935 - 7872132 | 121353.0 |
| llm class flavin-dependent oxidoreductase | DUE52_31460 | Not Available | Negative | 7872721 - 7873653 | 34005.7 |
| transposase | DUE52_31465 | Not Available | Negative | 7873771 - 7873863 | 3668.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
