Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_31370 | Not Available | Positive | 7839844 - 7840728 | 33967.1 |
| hypothetical protein | DUE52_31375 | Not Available | Positive | 7840680 - 7841528 | 32219.5 |
| duf4876 domain-containing protein | DUE52_31380 | Not Available | Positive | 7841570 - 7842811 | 44119.9 |
| hypothetical protein | DUE52_31385 | Not Available | Positive | 7842816 - 7844300 | 56957.4 |
| hypothetical protein | DUE52_31390 | Not Available | Positive | 7844348 - 7845190 | 32112.3 |
| hypothetical protein | DUE52_31395 | Not Available | Positive | 7845329 - 7845538 | 7869.99 |
| threonine synthase | DUE52_31400 | Not Available | Negative | 7845841 - 7847040 | 43765.8 |
| lysr family transcriptional regulator | DUE52_31405 | Not Available | Negative | 7847107 - 7848012 | 33917.6 |
| pentapeptide repeat-containing protein | DUE52_31410 | Not Available | Negative | 7848054 - 7848617 | 21106.2 |
| hypothetical protein | DUE52_31415 | Not Available | Negative | 7848764 - 7852024 | 118557.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
