Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucarate dehydratase | DUE52_31220 | Not Available | Positive | 7796262 - 7797584 | 48168.9 |
| hybrid sensor histidine kinase/response regulator | DUE52_31225 | Not Available | Positive | 7797687 - 7801823 | 155726.0 |
| cupin domain-containing protein | DUE52_31230 | Not Available | Negative | 7801820 - 7802146 | 12016.1 |
| short chain dehydrogenase | DUE52_31235 | Not Available | Positive | 7802194 - 7802940 | 26254.3 |
| alanine:cation symporter family protein | DUE52_31240 | Not Available | Positive | 7803085 - 7804512 | 50717.5 |
| glucuronyl hydrolase | DUE52_31245 | Not Available | Negative | 7804533 - 7805735 | 45380.4 |
| alginate lyase | DUE52_31250 | Not Available | Negative | 7805749 - 7806921 | 44346.4 |
| tonb-dependent receptor | DUE52_31255 | Not Available | Positive | 7807353 - 7810397 | 108830.0 |
| ragb/susd family nutrient uptake outer membrane protein | DUE52_31260 | Not Available | Positive | 7810424 - 7811863 | 52965.6 |
| site-specific integrase | DUE52_31265 | Not Available | Positive | 7812562 - 7813818 | 48783.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
