Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DUE52_31170 | Not Available | Negative | 7783467 - 7783814 | 12681.2 |
| hypothetical protein | DUE52_31175 | Not Available | Positive | 7784118 - 7784495 | 14409.0 |
| sigma-70 family rna polymerase sigma factor | DUE52_31180 | Not Available | Positive | 7784759 - 7785358 | 23892.8 |
| fecr family protein | DUE52_31185 | Not Available | Positive | 7785373 - 7786476 | 41913.1 |
| susc/raga family tonb-linked outer membrane protein | DUE52_31190 | Not Available | Positive | 7786675 - 7790172 | 128089.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DUE52_31195 | Not Available | Positive | 7790301 - 7791815 | 55047.1 |
| 2-dehydro-3-deoxyglucarate aldolase | DUE52_31200 | Not Available | Positive | 7791844 - 7792632 | 28686.3 |
| gntp family permease | DUE52_31205 | Not Available | Positive | 7792764 - 7794197 | 49568.2 |
| 2-hydroxy-3-oxopropionate reductase | DUE52_31210 | Not Available | Positive | 7794222 - 7795082 | 29729.3 |
| mannonate dehydratase | DUE52_31215 | Not Available | Positive | 7795113 - 7796231 | 41563.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
