Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-nitrite reductase | DUE52_31120 | Not Available | Negative | 7768027 - 7771611 | 131873.0 |
| nark family nitrate/nitrite mfs transporter | DUE52_31125 | Not Available | Negative | 7771726 - 7773027 | 46660.1 |
| hypothetical protein | DUE52_31130 | Not Available | Negative | 7773046 - 7774569 | 56135.0 |
| uroporphyrinogen-iii c-methyltransferase | DUE52_31135 | Not Available | Negative | 7774837 - 7775595 | 26862.6 |
| nitrite reductase large subunit | DUE52_31140 | Not Available | Positive | 7775874 - 7778393 | 92007.8 |
| nitrite reductase (nad(p)h) small subunit | DUE52_31145 | Not Available | Positive | 7778490 - 7778846 | 13191.7 |
| histidine kinase | DUE52_31150 | Not Available | Positive | 7778854 - 7780311 | 55041.7 |
| dna-binding response regulator | DUE52_31155 | Not Available | Positive | 7780311 - 7780997 | 25570.9 |
| alpha-l-fucosidase | DUE52_31160 | Not Available | Negative | 7781020 - 7782777 | 65898.7 |
| hypothetical protein | DUE52_31165 | Not Available | Positive | 7783019 - 7783360 | 13357.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
