Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prohibitin family protein | DUE52_31070 | Not Available | Positive | 7759384 - 7760229 | 31548.9 |
| ydcf family protein | DUE52_31075 | Not Available | Positive | 7760386 - 7761054 | 25712.6 |
| carbonic anhydrase family protein | DUE52_31080 | Not Available | Positive | 7761385 - 7762143 | 28530.8 |
| transposase | DUE52_31085 | Not Available | Negative | 7762230 - 7762321 | 3551.35 |
| is200/is605 family transposase | DUE52_31090 | Not Available | Positive | 7763251 - 7763703 | 17556.0 |
| srpbcc domain-containing protein | DUE52_31095 | Not Available | Negative | 7763704 - 7764147 | 16585.4 |
| hypothetical protein | DUE52_31100 | Not Available | Positive | 7764504 - 7765421 | 35719.6 |
| hypothetical protein | DUE52_31105 | Not Available | Positive | 7765436 - 7765966 | 20831.9 |
| hypothetical protein | DUE52_31110 | Not Available | Negative | 7765995 - 7766471 | 18479.6 |
| rubredoxin | DUE52_31115 | Not Available | Negative | 7766474 - 7767949 | 57117.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
