Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp synthase | DUE52_31020 | Not Available | Negative | 7750776 - 7751237 | 16723.8 |
| lysine--trna ligase | DUE52_31025 | Not Available | Negative | 7751251 - 7752981 | 65959.2 |
| spfh domain-containing protein | DUE52_31030 | Not Available | Positive | 7753175 - 7754026 | 30915.7 |
| arc family dna-binding protein | DUE52_31035 | Not Available | Positive | 7754127 - 7754318 | 7200.48 |
| type iii pantothenate kinase | DUE52_31040 | Not Available | Negative | 7754315 - 7755133 | 29287.6 |
| class a beta-lactamase-related serine hydrolase | DUE52_31045 | Not Available | Positive | 7755191 - 7756492 | 48259.6 |
| duf4065 domain-containing protein | DUE52_31050 | Not Available | Positive | 7756623 - 7757099 | 18114.4 |
| hypothetical protein | DUE52_31055 | Not Available | Positive | 7757086 - 7757448 | 13742.6 |
| duf4886 domain-containing protein | DUE52_31060 | Not Available | Positive | 7758018 - 7758986 | 35598.1 |
| hypothetical protein | DUE52_31065 | Not Available | Positive | 7759185 - 7759403 | 8036.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
