Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rieske (2fe-2s) protein | DUE52_30970 | Not Available | Negative | 7740930 - 7741403 | 17113.2 |
| hypothetical protein | DUE52_30975 | Not Available | Negative | 7741481 - 7743028 | 57209.1 |
| rna polymerase sigma factor | DUE52_30980 | Not Available | Negative | 7743000 - 7743569 | 22138.5 |
| hypothetical protein | DUE52_30985 | Not Available | Negative | 7743737 - 7744594 | 31397.9 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | DUE52_30990 | Not Available | Negative | 7744749 - 7745996 | 45851.5 |
| gliding motility-associated c-terminal domain-containing protein | DUE52_30995 | Not Available | Positive | 7746251 - 7748194 | 70121.0 |
| ybab/ebfc family nucleoid-associated protein | DUE52_31000 | Not Available | Positive | 7748332 - 7748667 | 12289.0 |
| glycosyltransferase family 2 protein | DUE52_31005 | Not Available | Positive | 7748671 - 7749702 | 39325.2 |
| pspc domain-containing protein | DUE52_31010 | Not Available | Negative | 7749766 - 7749987 | 8606.75 |
| cold-shock protein | DUE52_31015 | Not Available | Positive | 7750410 - 7750616 | 7612.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
