Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella punicea |
| Strain | strain ZZJ9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1929591 bp
Thymine Count
1930276 bp
Guanine Count
2055163 bp
Cytosine Count
2091296 bp
Genome Length
8006342 bp
Protein-coding Genes
6302 genes
Non-Coding Genes
44 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exo-alpha-sialidase | DUE52_30920 | Not Available | Negative | 7718514 - 7719470 | 33582.9 |
| flagellar motor protein motb | DUE52_30925 | Not Available | Positive | 7719852 - 7722323 | 91875.1 |
| t9ss c-terminal target domain-containing protein | DUE52_30930 | Not Available | Negative | 7722425 - 7729288 | 239903.0 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DUE52_30935 | Not Available | Positive | 7729605 - 7730411 | 29849.7 |
| t9ss c-terminal target domain-containing protein | DUE52_30940 | Not Available | Negative | 7730500 - 7736550 | 213439.0 |
| heme-copper oxidase subunit iii | DUE52_30945 | Not Available | Positive | 7737004 - 7737552 | 20785.1 |
| arac family transcriptional regulator | DUE52_30950 | Not Available | Positive | 7737568 - 7738386 | 31104.2 |
| nmra family transcriptional regulator | DUE52_30955 | Not Available | Positive | 7738457 - 7739299 | 30246.0 |
| ycei family protein | DUE52_30960 | Not Available | Negative | 7739620 - 7740207 | 21530.8 |
| hypothetical protein | DUE52_30965 | Not Available | Negative | 7740237 - 7740926 | 25060.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
